Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 C4orf46-202ENST00000508457 3358 ntTSL 5 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 PTPN3-201ENST00000262539 6832 ntTSL 5 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 EPB41L2-208ENST00000524581 3090 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 XCR1-201ENST00000309285 5281 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 LMOD1-201ENST00000367288 3970 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC2.42□□□□□ -2.02
LCE4AQ5TA78 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ARHGEF9-202ENST00000374870 4644 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 TMEM215-201ENST00000342743 3581 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 TTL-201ENST00000233336 14269 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 PPFIA2-211ENST00000548586 4033 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC133552.1-201ENST00000569988 4007 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 MGC15885-201ENST00000558940 2425 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 SLC33A1-202ENST00000392845 9217 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 PHC1P1-201ENST00000554937 3061 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 LOXHD1-211ENST00000579038 3632 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 PLAC4-201ENST00000623119 5588 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CCDC120-207ENST00000606812 3857 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 NELL2-202ENST00000395487 3203 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ERG-208ENST00000417133 5023 ntAPPRIS ALT1 TSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ZNF259P1-202ENST00000572422 4912 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 Y_RNA.42-201ENST00000362660 108 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RNA5SP232-201ENST00000364144 119 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 SNORA72.6-201ENST00000384520 129 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 MIR99A-201ENST00000384906 81 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 MIR147B-201ENST00000390185 80 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RNA5SP53-201ENST00000391299 120 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC026310.1-201ENST00000396004 378 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RNU6-1186P-201ENST00000410429 97 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 BX510359.3-201ENST00000422168 306 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC005517.1-201ENST00000452091 489 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC040975.1-201ENST00000472104 316 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RNU6-542P-201ENST00000516405 103 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 SNORD67.1-201ENST00000516618 108 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 MIR4312-201ENST00000579909 76 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 RN7SL835P-201ENST00000579920 262 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC079587.1-201ENST00000603846 277 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC140658.6-201ENST00000603958 201 ntBASIC2.41□□□□□ -2.02
LCE4AQ5TA78 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ZNF17-201ENST00000307658 2716 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 CALCR-205ENST00000421592 3626 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 UBE3B-207ENST00000537063 3600 ntTSL 3 BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 DGKK-201ENST00000611977 7407 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LCE4AQ5TA78 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms