Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SCARNA15.2-201ENST00000516409 127 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-677P-201ENST00000516914 101 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 ADI1P3-201ENST00000549509 470 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 MIR3690-201ENST00000580266 75 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AC018638.8-201ENST00000588755 281 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 AL158032.1-201ENST00000605401 106 ntBASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
HIST1H2AAQ96QV6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 Y_RNA.70-201ENST00000362886 110 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 Y_RNA.231-201ENST00000364358 102 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNA5SP505-201ENST00000364748 108 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-398P-201ENST00000384143 109 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-190P-201ENST00000384154 102 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 MIR514A2-201ENST00000385131 88 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 MIR514A3-201ENST00000385132 88 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC091390.3-201ENST00000426478 338 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC098614.3-201ENST00000438957 440 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-953P-201ENST00000459154 107 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RPL21P8-201ENST00000465083 535 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC146944.2-203ENST00000502493 354 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC008628.2-201ENST00000502605 298 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC083829.1-201ENST00000503756 657 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AL592156.1-201ENST00000508758 304 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC114786.4-201ENST00000508771 728 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC139495.1-202ENST00000513164 354 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-507P-201ENST00000516045 100 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 HIGD1AP5-201ENST00000529959 259 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RNU6-89P-201ENST00000606519 100 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AL357078.3-201ENST00000607528 618 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC034102.8-201ENST00000615146 484 ntBASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HIST1H2AAQ96QV6 MTND4P14-201ENST00000435799 1354 ntBASIC3.65□□□□□ -1.82
HIST1H2AAQ96QV6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HIST1H2AAQ96QV6 RNA5SP388-201ENST00000362584 119 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RNVU1-6-201ENST00000364688 164 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RNU4-66P-201ENST00000365199 138 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RNU4-46P-201ENST00000410818 138 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 BX323014.1-201ENST00000412876 237 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 HMGB1P27-201ENST00000431429 603 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 CBWD4P-201ENST00000445695 655 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 PRDX3P3-201ENST00000447765 522 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 PMCHL2-203ENST00000457791 237 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RPL23AP24-201ENST00000458203 385 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RN7SL585P-201ENST00000470538 280 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RPS29P22-201ENST00000472363 168 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RPL23AP11-201ENST00000475260 469 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 RPL21P99-201ENST00000480369 423 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 HMGN1P12-201ENST00000499125 195 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AC093840.1-201ENST00000511599 336 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 NARSP2-201ENST00000518524 679 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 IFITM8P-201ENST00000522529 394 ntBASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.65□□□□□ -1.83
HIST1H2AAQ96QV6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms