Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHDQ96IW2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.73□□□□□ -1.65
SHDQ96IW2 AC063976.2-201ENST00000425667 3556 ntBASIC4.73□□□□□ -1.65
SHDQ96IW2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHDQ96IW2 HSPA8P4-201ENST00000511877 1920 ntBASIC4.73□□□□□ -1.65
SHDQ96IW2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHDQ96IW2 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHDQ96IW2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHDQ96IW2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SHDQ96IW2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
SHDQ96IW2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
SHDQ96IW2 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.72□□□□□ -1.65
SHDQ96IW2 SNORA7.2-201ENST00000364446 145 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RNA5SP366-201ENST00000365454 123 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RNU6-128P-201ENST00000383976 107 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RNU6-45P-201ENST00000384471 107 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 AL590762.2-201ENST00000395798 571 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 RPL23AP26-201ENST00000412728 464 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 AL669831.1-202ENST00000428504 417 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RPS3AP52-201ENST00000435639 297 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RN7SL98P-201ENST00000462271 300 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RPL7P43-201ENST00000478876 753 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 AC020593.1-201ENST00000507399 299 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RN7SKP24-201ENST00000515888 284 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.72□□□□□ -1.65
SHDQ96IW2 AP003730.1-201ENST00000524605 285 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.72□□□□□ -1.65
SHDQ96IW2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.72□□□□□ -1.65
SHDQ96IW2 AC105129.1-201ENST00000560250 297 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.72□□□□□ -1.65
SHDQ96IW2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.72□□□□□ -1.65
SHDQ96IW2 MIR3653-201ENST00000625572 110 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.72□□□□□ -1.65
SHDQ96IW2 AC008013.2-202ENST00000637965 364 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 OR4G2P-202ENST00000641004 1759 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 AC000123.3-201ENST00000624029 4975 ntBASIC4.72□□□□□ -1.65
SHDQ96IW2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHDQ96IW2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHDQ96IW2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.71□□□□□ -1.65
SHDQ96IW2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.71□□□□□ -1.65
SHDQ96IW2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHDQ96IW2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SHDQ96IW2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
SHDQ96IW2 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 AC021146.4-201ENST00000309229 279 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.71□□□□□ -1.66
SHDQ96IW2 SNORD116-11-201ENST00000383882 92 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 Y_RNA.480-201ENST00000384364 102 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AL360182.1-201ENST00000397433 468 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 RPS4XP7-201ENST00000406274 780 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 RNU6-628P-201ENST00000410675 107 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.71□□□□□ -1.66
SHDQ96IW2 RPL21P109-201ENST00000422213 475 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AL353729.1-201ENST00000425044 720 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.71□□□□□ -1.66
SHDQ96IW2 PHBP16-201ENST00000446318 950 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 HMGN2P21-201ENST00000447764 270 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 SCARNA10-201ENST00000459255 330 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 RPL21P41-201ENST00000459863 264 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 RPS27P27-201ENST00000498779 255 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.71□□□□□ -1.66
SHDQ96IW2 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.71□□□□□ -1.66
SHDQ96IW2 RNU6-1069P-201ENST00000516612 133 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 RNU6-914P-201ENST00000516749 109 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.71□□□□□ -1.66
SHDQ96IW2 ATP5F1P5-201ENST00000526403 760 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AP005597.4-201ENST00000526762 229 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AC027369.5-201ENST00000533838 755 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.71□□□□□ -1.66
SHDQ96IW2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.71□□□□□ -1.66
SHDQ96IW2 OR8R1P-201ENST00000543943 764 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.71□□□□□ -1.66
SHDQ96IW2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.71□□□□□ -1.66
SHDQ96IW2 AC093249.4-201ENST00000564755 259 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 MTCYBP13-201ENST00000578634 1093 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 AL355810.1-201ENST00000614629 552 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 MIR492-201ENST00000638676 116 ntBASIC4.71□□□□□ -1.66
SHDQ96IW2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.71□□□□□ -1.66
SHDQ96IW2 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.71□□□□□ -1.66
SHDQ96IW2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHDQ96IW2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SHDQ96IW2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
SHDQ96IW2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms