Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHMP2BQ9UQN3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 TUBB8P6-201ENST00000436895 1288 ntBASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 SOX15-203ENST00000570788 1093 ntBASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHMP2BQ9UQN3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 AC093525.10-201ENST00000625130 1569 ntBASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 MIR935-201ENST00000401179 91 ntBASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 AL138781.1-201ENST00000566567 1274 ntBASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 AL512353.2-201ENST00000448759 1962 ntBASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHMP2BQ9UQN3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 Z98044.1-201ENST00000632503 1764 ntBASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHMP2BQ9UQN3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 AL121829.2-201ENST00000620908 328 ntBASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CHMP2BQ9UQN3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms