Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 UNC93B2-201ENST00000285383 730 ntBASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 TSPY15P-201ENST00000457163 923 ntBASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 AC097488.1-201ENST00000507834 756 ntBASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 AL049812.1-201ENST00000432563 2267 ntBASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHA4Q9UN74 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 AC079598.2-202ENST00000546624 1451 ntBASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SLC25A1P4-201ENST00000567977 778 ntBASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
PCDHA4Q9UN74 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 AP000525.1-201ENST00000608286 694 ntBASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHA4Q9UN74 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 MFAP1P1-201ENST00000442257 1255 ntBASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHA4Q9UN74 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
PCDHA4Q9UN74 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHA4Q9UN74 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms