Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HACD3Q9P035 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.32■□□□□ 0.68
HACD3Q9P035 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.32■□□□□ 0.68
HACD3Q9P035 RPS2P4-201ENST00000476944 856 ntBASIC19.32■□□□□ 0.68
HACD3Q9P035 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.32■□□□□ 0.68
HACD3Q9P035 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
HACD3Q9P035 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
HACD3Q9P035 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.32■□□□□ 0.68
HACD3Q9P035 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.32■□□□□ 0.68
HACD3Q9P035 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.32■□□□□ 0.68
HACD3Q9P035 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HACD3Q9P035 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
HACD3Q9P035 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
HACD3Q9P035 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HACD3Q9P035 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
HACD3Q9P035 AC004980.1-204ENST00000429707 299 ntBASIC19.31■□□□□ 0.68
HACD3Q9P035 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
HACD3Q9P035 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.31■□□□□ 0.68
HACD3Q9P035 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.31■□□□□ 0.68
HACD3Q9P035 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HACD3Q9P035 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
HACD3Q9P035 AL031985.4-201ENST00000642138 673 ntBASIC19.31■□□□□ 0.68
HACD3Q9P035 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
HACD3Q9P035 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.31■□□□□ 0.68
HACD3Q9P035 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
HACD3Q9P035 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HACD3Q9P035 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HACD3Q9P035 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.31■□□□□ 0.68
HACD3Q9P035 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.3■□□□□ 0.68
HACD3Q9P035 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 LINC01465-201ENST00000408887 1940 ntBASIC19.3■□□□□ 0.68
HACD3Q9P035 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.3■□□□□ 0.68
HACD3Q9P035 AC233702.5-201ENST00000584107 538 ntBASIC19.3■□□□□ 0.68
HACD3Q9P035 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.3■□□□□ 0.68
HACD3Q9P035 AP006294.2-201ENST00000641667 209 ntBASIC19.3■□□□□ 0.68
HACD3Q9P035 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.3■□□□□ 0.68
HACD3Q9P035 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HACD3Q9P035 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HACD3Q9P035 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HACD3Q9P035 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.29■□□□□ 0.68
HACD3Q9P035 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HACD3Q9P035 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.29■□□□□ 0.68
HACD3Q9P035 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HACD3Q9P035 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
HACD3Q9P035 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.29■□□□□ 0.68
HACD3Q9P035 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms