Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ECHDC1Q9NTX5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 TSPY15P-201ENST00000457163 923 ntBASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ECHDC1Q9NTX5 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 AC097488.1-201ENST00000507834 756 ntBASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SLC25A1P4-201ENST00000567977 778 ntBASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 AC079598.2-202ENST00000546624 1451 ntBASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ECHDC1Q9NTX5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 UNC93B2-201ENST00000285383 730 ntBASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ECHDC1Q9NTX5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 AP000525.1-201ENST00000608286 694 ntBASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.27■■□□□ 1.32
ECHDC1Q9NTX5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
ECHDC1Q9NTX5 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
ECHDC1Q9NTX5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms