Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 MYB-201ENST00000316528 3571 ntTSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 MYB-241ENST00000616088 3573 ntTSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 FP700111.2-201ENST00000619190 1892 ntBASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 AC108860.2-201ENST00000562760 2183 ntBASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
CDC42SE1Q9NRR8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 AL121761.2-201ENST00000598007 1648 ntBASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 AL359504.2-201ENST00000605506 1601 ntBASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
CDC42SE1Q9NRR8 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
CDC42SE1Q9NRR8 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms