Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 MIPEPP3-201ENST00000412105 444 ntBASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 DUSP5P2-201ENST00000426873 1033 ntBASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 AL050303.2-201ENST00000619798 666 ntBASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 AC073111.5-205ENST00000641717 521 ntBASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CDC42SE2Q9NRR3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 TUBB8P6-201ENST00000436895 1288 ntBASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 KRT18P16-201ENST00000510337 1294 ntBASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CDC42SE2Q9NRR3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AC026471.1-201ENST00000564629 3026 ntBASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 BICD1-207ENST00000551848 1962 ntBASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 CDCA4P2-201ENST00000441182 718 ntBASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AC026185.1-201ENST00000445748 174 ntBASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDC42SE2Q9NRR3 AC092118.2-201ENST00000613495 667 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms