Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTPS2Q9NRF8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CTPS2Q9NRF8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 PRKY-204ENST00000533551 1019 ntBASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 AC104417.2-201ENST00000562989 1793 ntBASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTPS2Q9NRF8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 AC006058.3-201ENST00000606217 1069 ntBASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 AC006333.2-201ENST00000607957 2099 ntBASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.75■□□□□ 0.43
CTPS2Q9NRF8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTPS2Q9NRF8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms