Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A20Q9NP91 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 PRSS44-201ENST00000515154 1146 ntBASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 FITM1-202ENST00000559294 800 ntBASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 CKBP1-201ENST00000565489 1086 ntBASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 AP005242.2-201ENST00000580065 1175 ntBASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.36■□□□□ 0.53
SLC6A20Q9NP91 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A20Q9NP91 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 MMP23A-201ENST00000234610 1017 ntBASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 KRT18P21-201ENST00000515767 1272 ntBASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 AC012306.2-201ENST00000609350 630 ntBASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 AC097493.4-201ENST00000641197 219 ntBASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A20Q9NP91 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 IRX1P1-201ENST00000438849 1838 ntBASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC6A20Q9NP91 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.33■□□□□ 0.52
SLC6A20Q9NP91 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC6A20Q9NP91 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A20Q9NP91 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC6A20Q9NP91 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms