Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 AC136469.2-201ENST00000623944 1028 ntBASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VCX3AQ9NNX9 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 AP001271.2-201ENST00000624018 1556 ntBASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 AC126763.1-201ENST00000552015 2118 ntBASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.84■□□□□ 0.45
VCX3AQ9NNX9 AC093525.10-201ENST00000625130 1569 ntBASIC17.83■□□□□ 0.45
VCX3AQ9NNX9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VCX3AQ9NNX9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
VCX3AQ9NNX9 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 HSD17B1P1-201ENST00000590052 955 ntBASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VCX3AQ9NNX9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 FAM21FP-204ENST00000608637 956 ntBASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 AL162727.3-201ENST00000635661 2787 ntBASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VCX3AQ9NNX9 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms