Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 AC087499.1-201ENST00000418141 1075 ntBASIC22.55■■□□□ 1.2
RNF41Q9H4P4 CA15P1-201ENST00000481698 905 ntBASIC22.55■■□□□ 1.2
RNF41Q9H4P4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF41Q9H4P4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 FEM1AP3-201ENST00000403722 1741 ntBASIC22.54■■□□□ 1.2
RNF41Q9H4P4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 NAPSB-206ENST00000562112 1266 ntBASIC22.54■■□□□ 1.2
RNF41Q9H4P4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF41Q9H4P4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 IRX1P1-201ENST00000438849 1838 ntBASIC22.53■■□□□ 1.2
RNF41Q9H4P4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 KRT8P9-201ENST00000558927 1449 ntBASIC22.53■■□□□ 1.2
RNF41Q9H4P4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF41Q9H4P4 FP475955.4-201ENST00000623131 1990 ntBASIC22.52■■□□□ 1.2
RNF41Q9H4P4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 SLC25A1P2-201ENST00000430693 912 ntBASIC22.52■■□□□ 1.2
RNF41Q9H4P4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.52■■□□□ 1.2
RNF41Q9H4P4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF41Q9H4P4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 TSPY14P-201ENST00000303979 915 ntBASIC22.51■■□□□ 1.19
RNF41Q9H4P4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF41Q9H4P4 CYP2D8P-201ENST00000433633 1490 ntBASIC22.51■■□□□ 1.19
RNF41Q9H4P4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms