Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RNF152P1-201ENST00000397754 604 ntBASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 AL512604.3-201ENST00000569583 964 ntBASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ATXN3LQ9H3M9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 YBX1P2-201ENST00000489612 999 ntBASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.06■□□□□ 0.8
ATXN3LQ9H3M9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 KRT8P11-201ENST00000409686 1436 ntBASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 AP003041.3-201ENST00000527151 707 ntBASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.05■□□□□ 0.8
ATXN3LQ9H3M9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 AL158211.5-201ENST00000623583 2518 ntBASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 TSPY5P-201ENST00000426936 936 ntBASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 AC092647.4-201ENST00000457211 535 ntBASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.04■□□□□ 0.8
ATXN3LQ9H3M9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
ATXN3LQ9H3M9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms