Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 NTF6A-201ENST00000591175 560 ntBASIC16.29■□□□□ 0.2
MED28Q9H204 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.29■□□□□ 0.2
MED28Q9H204 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MED28Q9H204 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.29■□□□□ 0.2
MED28Q9H204 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 PKD1P5-201ENST00000532415 10291 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 TSPY13P-201ENST00000338964 914 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.28■□□□□ 0.2
MED28Q9H204 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 TSPY9P-201ENST00000440215 945 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 TSPY11P-201ENST00000442607 1045 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 MIR6724-1-201ENST00000616420 92 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 MIR6724-2-201ENST00000616483 92 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 MIR6724-4-201ENST00000617390 92 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 MIR6724-3-201ENST00000622482 92 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.28■□□□□ 0.2
MED28Q9H204 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
MED28Q9H204 AL162741.1-201ENST00000565563 1558 ntBASIC16.28■□□□□ 0.2
MED28Q9H204 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.28■□□□□ 0.2
MED28Q9H204 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
MED28Q9H204 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MED28Q9H204 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MED28Q9H204 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MED28Q9H204 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
MED28Q9H204 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MED28Q9H204 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 NFIC-211ENST00000641145 8399 ntBASIC16.27■□□□□ 0.2
MED28Q9H204 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.27■□□□□ 0.2
MED28Q9H204 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MED28Q9H204 IRX1P1-201ENST00000438849 1838 ntBASIC16.27■□□□□ 0.2
MED28Q9H204 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.27■□□□□ 0.2
MED28Q9H204 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MED28Q9H204 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.27■□□□□ 0.2
MED28Q9H204 MIR4787-201ENST00000607364 84 ntBASIC16.27■□□□□ 0.2
MED28Q9H204 AC012317.2-201ENST00000623305 2251 ntBASIC16.27■□□□□ 0.2
MED28Q9H204 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms