Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 AL390719.1-204ENST00000412397 1219 ntBASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 RN7SL471P-201ENST00000580476 299 ntBASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 IRX1P1-201ENST00000438849 1838 ntBASIC19.72■□□□□ 0.75
FOXP3Q9BZS1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 AC135050.7-201ENST00000624508 2218 ntBASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 AC009113.1-201ENST00000570267 2443 ntBASIC19.71■□□□□ 0.75
FOXP3Q9BZS1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXP3Q9BZS1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 WIZP1-201ENST00000531444 2299 ntBASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXP3Q9BZS1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 MIR718-201ENST00000390190 70 ntBASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 AC005829.2-201ENST00000571422 1056 ntBASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
FOXP3Q9BZS1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms