Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COPS4Q9BT78 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
COPS4Q9BT78 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 AL355472.2-201ENST00000422958 438 ntBASIC17.53■□□□□ 0.4
COPS4Q9BT78 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 AC005181.1-201ENST00000604782 1256 ntBASIC17.53■□□□□ 0.4
COPS4Q9BT78 AL589743.5-201ENST00000616611 1050 ntBASIC17.53■□□□□ 0.4
COPS4Q9BT78 OR10C1-204ENST00000622521 1039 ntBASIC17.53■□□□□ 0.4
COPS4Q9BT78 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 AL512353.2-201ENST00000448759 1962 ntBASIC17.53■□□□□ 0.4
COPS4Q9BT78 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COPS4Q9BT78 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
COPS4Q9BT78 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
COPS4Q9BT78 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.52■□□□□ 0.4
COPS4Q9BT78 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
COPS4Q9BT78 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
COPS4Q9BT78 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
COPS4Q9BT78 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 AC010980.2-201ENST00000587099 1412 ntBASIC17.51■□□□□ 0.39
COPS4Q9BT78 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.51■□□□□ 0.39
COPS4Q9BT78 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
COPS4Q9BT78 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms