Protein–RNA interactions for Protein: Q99956

DUSP9, Dual specificity protein phosphatase 9, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP9Q99956 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DUSP9Q99956 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.99■□□□□ 0.95
DUSP9Q99956 KRT16P5-201ENST00000455284 522 ntBASIC20.99■□□□□ 0.95
DUSP9Q99956 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
DUSP9Q99956 Z85996.1-201ENST00000494644 937 ntBASIC20.99■□□□□ 0.95
DUSP9Q99956 AC093827.2-201ENST00000512654 315 ntBASIC20.99■□□□□ 0.95
DUSP9Q99956 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DUSP9Q99956 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.99■□□□□ 0.95
DUSP9Q99956 RN7SL471P-201ENST00000580476 299 ntBASIC20.99■□□□□ 0.95
DUSP9Q99956 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DUSP9Q99956 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DUSP9Q99956 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.99■□□□□ 0.95
DUSP9Q99956 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DUSP9Q99956 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DUSP9Q99956 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.99■□□□□ 0.95
DUSP9Q99956 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.99■□□□□ 0.95
DUSP9Q99956 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.98■□□□□ 0.95
DUSP9Q99956 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.98■□□□□ 0.95
DUSP9Q99956 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.98■□□□□ 0.95
DUSP9Q99956 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
DUSP9Q99956 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.98■□□□□ 0.95
DUSP9Q99956 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
DUSP9Q99956 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.98■□□□□ 0.95
DUSP9Q99956 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.98■□□□□ 0.95
DUSP9Q99956 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.98■□□□□ 0.95
DUSP9Q99956 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
DUSP9Q99956 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.98■□□□□ 0.95
DUSP9Q99956 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DUSP9Q99956 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 Z98044.1-201ENST00000632503 1764 ntBASIC20.97■□□□□ 0.95
DUSP9Q99956 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 AC104581.1-202ENST00000635932 2618 ntBASIC20.97■□□□□ 0.95
DUSP9Q99956 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
DUSP9Q99956 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.97■□□□□ 0.95
DUSP9Q99956 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.97■□□□□ 0.95
DUSP9Q99956 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 UBE2SP1-201ENST00000450587 669 ntBASIC20.97■□□□□ 0.95
DUSP9Q99956 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
DUSP9Q99956 AL359736.2-201ENST00000621992 437 ntBASIC20.97■□□□□ 0.95
DUSP9Q99956 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.97■□□□□ 0.95
DUSP9Q99956 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DUSP9Q99956 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
DUSP9Q99956 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
DUSP9Q99956 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 AC009113.1-201ENST00000570267 2443 ntBASIC20.96■□□□□ 0.95
DUSP9Q99956 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
DUSP9Q99956 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.96■□□□□ 0.95
DUSP9Q99956 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
DUSP9Q99956 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.96■□□□□ 0.95
DUSP9Q99956 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.96■□□□□ 0.95
DUSP9Q99956 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.96■□□□□ 0.95
DUSP9Q99956 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.96■□□□□ 0.95
DUSP9Q99956 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.96■□□□□ 0.95
DUSP9Q99956 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DUSP9Q99956 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
DUSP9Q99956 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.95■□□□□ 0.95
DUSP9Q99956 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
DUSP9Q99956 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.95■□□□□ 0.94
DUSP9Q99956 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
DUSP9Q99956 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
DUSP9Q99956 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
DUSP9Q99956 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms