Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
MUC4Q99102 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC13.95□□□□□ -0.18
MUC4Q99102 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MUC4Q99102 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.95□□□□□ -0.18
MUC4Q99102 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
MUC4Q99102 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.95□□□□□ -0.18
MUC4Q99102 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MUC4Q99102 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.94□□□□□ -0.18
MUC4Q99102 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.94□□□□□ -0.18
MUC4Q99102 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
MUC4Q99102 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC13.94□□□□□ -0.18
MUC4Q99102 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.94□□□□□ -0.18
MUC4Q99102 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MUC4Q99102 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
MUC4Q99102 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.94□□□□□ -0.18
MUC4Q99102 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.94□□□□□ -0.18
MUC4Q99102 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MUC4Q99102 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MUC4Q99102 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MUC4Q99102 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
MUC4Q99102 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 AC006058.3-201ENST00000606217 1069 ntBASIC13.93□□□□□ -0.18
MUC4Q99102 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.93□□□□□ -0.18
MUC4Q99102 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 IRX1P1-201ENST00000438849 1838 ntBASIC13.93□□□□□ -0.18
MUC4Q99102 AC026366.1-201ENST00000488803 879 ntBASIC13.93□□□□□ -0.18
MUC4Q99102 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.93□□□□□ -0.18
MUC4Q99102 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 ANKRD18DP-204ENST00000455355 1975 ntBASIC13.93□□□□□ -0.18
MUC4Q99102 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.93□□□□□ -0.18
MUC4Q99102 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MUC4Q99102 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms