Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 KRT18P21-201ENST00000515767 1272 ntBASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.85■□□□□ 0.77
CDK5RAP1Q96SZ6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDK5RAP1Q96SZ6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 TMPOP1-202ENST00000424642 1267 ntBASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.83■□□□□ 0.77
CDK5RAP1Q96SZ6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.83■□□□□ 0.76
CDK5RAP1Q96SZ6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 INGX-201ENST00000359239 846 ntBASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDK5RAP1Q96SZ6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 AP003041.3-201ENST00000527151 707 ntBASIC19.81■□□□□ 0.76
CDK5RAP1Q96SZ6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms