Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NEK1Q96PY6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NEK1Q96PY6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
NEK1Q96PY6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.63■■□□□ 1.21
NEK1Q96PY6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.62■■□□□ 1.21
NEK1Q96PY6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
NEK1Q96PY6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
NEK1Q96PY6 AC120498.9-201ENST00000339021 3867 ntBASIC22.61■■□□□ 1.21
NEK1Q96PY6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 AC093503.3-201ENST00000624917 2352 ntBASIC22.61■■□□□ 1.21
NEK1Q96PY6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 RCC2P6-201ENST00000526625 1557 ntBASIC22.61■■□□□ 1.21
NEK1Q96PY6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 AL135905.2-201ENST00000584934 1404 ntBASIC22.61■■□□□ 1.21
NEK1Q96PY6 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 AL031985.4-201ENST00000642138 673 ntBASIC22.61■■□□□ 1.21
NEK1Q96PY6 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
NEK1Q96PY6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NEK1Q96PY6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 AC091390.4-202ENST00000476426 537 ntBASIC22.6■■□□□ 1.21
NEK1Q96PY6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NEK1Q96PY6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NEK1Q96PY6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 KRT8P11-201ENST00000409686 1436 ntBASIC22.59■■□□□ 1.21
NEK1Q96PY6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.59■■□□□ 1.21
NEK1Q96PY6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
NEK1Q96PY6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
NEK1Q96PY6 AC004951.3-201ENST00000418645 1148 ntBASIC22.59■■□□□ 1.21
NEK1Q96PY6 FAM197Y1-201ENST00000421178 764 ntBASIC22.59■■□□□ 1.21
NEK1Q96PY6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
NEK1Q96PY6 AC026271.3-201ENST00000571884 352 ntBASIC22.59■■□□□ 1.21
NEK1Q96PY6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NEK1Q96PY6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms