Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 AL121772.3-201ENST00000610840 674 ntBASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NECTIN4Q96NY8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 TSPY19P-201ENST00000418461 509 ntBASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 TSPY18P-201ENST00000441642 509 ntBASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.78■□□□□ 0.76
NECTIN4Q96NY8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 KRT18P1-202ENST00000452408 1331 ntBASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NECTIN4Q96NY8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
NECTIN4Q96NY8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 AC091304.2-201ENST00000564639 760 ntBASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NECTIN4Q96NY8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NECTIN4Q96NY8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms