Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ALPK3Q96L96 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ALPK3Q96L96 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 GPR32P1-201ENST00000601788 811 ntBASIC20.86■□□□□ 0.93
ALPK3Q96L96 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ALPK3Q96L96 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.86■□□□□ 0.93
ALPK3Q96L96 NSUN5P1-202ENST00000421140 1535 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 NSUN5P2-203ENST00000457352 1529 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 SMG8-203ENST00000578922 2178 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 RNPS1P1-201ENST00000507437 918 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 AP005901.3-202ENST00000581653 237 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 LINC01711-201ENST00000598340 967 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 Z83836.1-201ENST00000624605 1642 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 FEM1AP4-201ENST00000443167 1987 ntBASIC20.85■□□□□ 0.93
ALPK3Q96L96 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ALPK3Q96L96 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.85■□□□□ 0.93
ALPK3Q96L96 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 AC005104.2-201ENST00000427818 678 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 Z69720.1-201ENST00000601483 472 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 FAM197Y8-203ENST00000450145 560 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 AC145285.3-201ENST00000564603 959 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.84■□□□□ 0.93
ALPK3Q96L96 AL592071.1-201ENST00000611956 408 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 AC007225.1-201ENST00000566331 1836 ntBASIC20.84■□□□□ 0.93
ALPK3Q96L96 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ALPK3Q96L96 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALPK3Q96L96 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ALPK3Q96L96 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ALPK3Q96L96 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ALPK3Q96L96 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ALPK3Q96L96 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.83■□□□□ 0.93
ALPK3Q96L96 AL390719.2-201ENST00000606993 987 ntBASIC20.83■□□□□ 0.93
ALPK3Q96L96 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms