Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.21■□□□□ 0.83
CALR3Q96L12 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.21■□□□□ 0.83
CALR3Q96L12 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CALR3Q96L12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 WIZP1-201ENST00000531444 2299 ntBASIC20.21■□□□□ 0.83
CALR3Q96L12 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CALR3Q96L12 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.21■□□□□ 0.83
CALR3Q96L12 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.21■□□□□ 0.83
CALR3Q96L12 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALR3Q96L12 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.2■□□□□ 0.82
CALR3Q96L12 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.2■□□□□ 0.82
CALR3Q96L12 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CALR3Q96L12 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.2■□□□□ 0.82
CALR3Q96L12 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CALR3Q96L12 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CALR3Q96L12 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CALR3Q96L12 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.19■□□□□ 0.82
CALR3Q96L12 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.19■□□□□ 0.82
CALR3Q96L12 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CALR3Q96L12 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.19■□□□□ 0.82
CALR3Q96L12 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CALR3Q96L12 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.19■□□□□ 0.82
CALR3Q96L12 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.19■□□□□ 0.82
CALR3Q96L12 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.19■□□□□ 0.82
CALR3Q96L12 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CALR3Q96L12 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.18■□□□□ 0.82
CALR3Q96L12 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CALR3Q96L12 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.18■□□□□ 0.82
CALR3Q96L12 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 AL138781.1-201ENST00000566567 1274 ntBASIC20.18■□□□□ 0.82
CALR3Q96L12 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.18■□□□□ 0.82
CALR3Q96L12 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CALR3Q96L12 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.18■□□□□ 0.82
CALR3Q96L12 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.18■□□□□ 0.82
CALR3Q96L12 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CALR3Q96L12 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CALR3Q96L12 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CALR3Q96L12 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.17■□□□□ 0.82
CALR3Q96L12 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms