Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AC026271.3-201ENST00000571884 352 ntBASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AF186192.3-201ENST00000583427 947 ntBASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AC083906.6-201ENST00000641366 219 ntBASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 Z98044.1-201ENST00000632503 1764 ntBASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PDLIM5Q96HC4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 KRT16P1-201ENST00000399124 1418 ntBASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 KRT8P11-201ENST00000409686 1436 ntBASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TSPY20P-201ENST00000450910 630 ntBASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 PRSS44-201ENST00000515154 1146 ntBASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 AC073195.1-201ENST00000607241 877 ntBASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.67■□□□□ 0.58
PDLIM5Q96HC4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 KRT18P29-201ENST00000397031 1267 ntBASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 AL031985.4-201ENST00000642138 673 ntBASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PDLIM5Q96HC4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 RCC2P6-201ENST00000526625 1557 ntBASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms