Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 CDCA4P2-201ENST00000441182 718 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 AL512353.2-201ENST00000448759 1962 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 RPS2P52-201ENST00000469610 820 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 AC090164.3-201ENST00000610780 2143 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 AC005332.8-201ENST00000622750 2735 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 Z98044.1-201ENST00000632503 1764 ntBASIC18.36■□□□□ 0.53
VPS33AQ96AX1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VPS33AQ96AX1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AC135050.7-201ENST00000624508 2218 ntBASIC18.35■□□□□ 0.53
VPS33AQ96AX1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AC093525.10-201ENST00000625130 1569 ntBASIC18.35■□□□□ 0.53
VPS33AQ96AX1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VPS33AQ96AX1 AL390961.4-201ENST00000623958 2535 ntBASIC18.34■□□□□ 0.53
VPS33AQ96AX1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VPS33AQ96AX1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 AP006587.1-201ENST00000534129 1502 ntBASIC18.33■□□□□ 0.53
VPS33AQ96AX1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 KRT8P8-201ENST00000434750 1448 ntBASIC18.33■□□□□ 0.53
VPS33AQ96AX1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
VPS33AQ96AX1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms