Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAF3IP1Q8TDR0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 C1QL1P1-201ENST00000568105 661 ntBASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 AC004408.2-201ENST00000623613 2777 ntBASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAF3IP1Q8TDR0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
TRAF3IP1Q8TDR0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 CD99P1-205ENST00000527459 561 ntBASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 AL049812.1-201ENST00000432563 2267 ntBASIC19.9■□□□□ 0.78
TRAF3IP1Q8TDR0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.89■□□□□ 0.78
TRAF3IP1Q8TDR0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRAF3IP1Q8TDR0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRAF3IP1Q8TDR0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAF3IP1Q8TDR0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms