Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDND2Q8NHS1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 KRT18P22-201ENST00000402024 1347 ntBASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 AC125437.2-201ENST00000625180 2167 ntBASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CLDND2Q8NHS1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 AP001271.2-201ENST00000624018 1556 ntBASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 AC005521.1-201ENST00000393351 872 ntBASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.23■□□□□ 0.19
CLDND2Q8NHS1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AC113347.1-201ENST00000413321 391 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 CRYGFP-201ENST00000418459 633 ntBASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.22■□□□□ 0.19
CLDND2Q8NHS1 AC097488.1-201ENST00000507834 756 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms