Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 AP000692.2-201ENST00000608391 879 ntBASIC21.62■■□□□ 1.05
RETREG2Q8NC44 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 AC098818.2-201ENST00000564925 2320 ntBASIC21.62■■□□□ 1.05
RETREG2Q8NC44 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETREG2Q8NC44 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 HMGA1P5-201ENST00000412453 271 ntBASIC21.61■■□□□ 1.05
RETREG2Q8NC44 FAM87A-204ENST00000613235 858 ntBASIC21.61■■□□□ 1.05
RETREG2Q8NC44 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETREG2Q8NC44 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 Z82202.1-201ENST00000623446 1880 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 INGX-201ENST00000359239 846 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC022616.7-201ENST00000525383 220 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC011298.2-201ENST00000617989 482 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC116562.4-202ENST00000641738 218 ntBASIC21.6■■□□□ 1.05
RETREG2Q8NC44 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RETREG2Q8NC44 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 AC063952.2-201ENST00000498792 1227 ntBASIC21.59■■□□□ 1.05
RETREG2Q8NC44 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 AC091076.1-201ENST00000610741 619 ntBASIC21.59■■□□□ 1.05
RETREG2Q8NC44 HLA-A-209ENST00000638375 975 ntBASIC21.59■■□□□ 1.05
RETREG2Q8NC44 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETREG2Q8NC44 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms