Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 WIZP1-201ENST00000531444 2299 ntBASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 KRT8P41-201ENST00000533985 1514 ntBASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPNE8Q86YQ8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 AL160286.2-201ENST00000567150 934 ntBASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 AC124016.1-201ENST00000609552 612 ntBASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.03■□□□□ 0.8
CPNE8Q86YQ8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 AC239809.2-201ENST00000415381 517 ntBASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPNE8Q86YQ8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CPNE8Q86YQ8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 Z85996.1-201ENST00000494644 937 ntBASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 AC006058.3-201ENST00000606217 1069 ntBASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.01■□□□□ 0.79
CPNE8Q86YQ8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms