Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 AC128676.1-201ENST00000454392 318 ntBASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 CD99P1-205ENST00000527459 561 ntBASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CHD1LQ86WJ1 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.61■■□□□ 1.37
CHD1LQ86WJ1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 Z98044.1-201ENST00000632503 1764 ntBASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 AL445675.2-201ENST00000620291 557 ntBASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC23.6■■□□□ 1.37
CHD1LQ86WJ1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 NEFHP1-201ENST00000412845 2629 ntBASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CHD1LQ86WJ1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 POU5F1P3-201ENST00000428824 1078 ntBASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.58■■□□□ 1.37
CHD1LQ86WJ1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms