Protein–RNA interactions for Protein: Q7L0J3

SV2A, Synaptic vesicle glycoprotein 2A, humanhuman

Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SV2AQ7L0J3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SV2AQ7L0J3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SV2AQ7L0J3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SV2AQ7L0J3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SV2AQ7L0J3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SV2AQ7L0J3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 AC018445.3-201ENST00000624177 1945 ntBASIC20.61■□□□□ 0.89
SV2AQ7L0J3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 MIR4497-201ENST00000583208 89 ntBASIC20.61■□□□□ 0.89
SV2AQ7L0J3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 AC087289.5-201ENST00000586076 3175 ntBASIC20.61■□□□□ 0.89
SV2AQ7L0J3 AC098818.2-201ENST00000564925 2320 ntBASIC20.61■□□□□ 0.89
SV2AQ7L0J3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SV2AQ7L0J3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 PRSS44-201ENST00000515154 1146 ntBASIC20.6■□□□□ 0.89
SV2AQ7L0J3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 MIR4785-201ENST00000585005 73 ntBASIC20.6■□□□□ 0.89
SV2AQ7L0J3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.6■□□□□ 0.89
SV2AQ7L0J3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 BX323043.1-201ENST00000641006 1765 ntBASIC20.59■□□□□ 0.89
SV2AQ7L0J3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SV2AQ7L0J3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 AL596275.1-201ENST00000423464 877 ntBASIC20.58■□□□□ 0.89
SV2AQ7L0J3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 CKBP1-201ENST00000565489 1086 ntBASIC20.58■□□□□ 0.89
SV2AQ7L0J3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 DGCR10-201ENST00000609839 495 ntBASIC20.58■□□□□ 0.89
SV2AQ7L0J3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SV2AQ7L0J3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms