Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ABHD17AP1-201ENST00000358206 933 ntBASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 AC098590.1-201ENST00000468126 897 ntBASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NHLRC1Q6VVB1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 KRT18P29-201ENST00000397031 1267 ntBASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 AL160286.2-201ENST00000567150 934 ntBASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 AL445675.2-201ENST00000620291 557 ntBASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 KRT8P41-201ENST00000533985 1514 ntBASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
NHLRC1Q6VVB1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 AC093503.3-201ENST00000624917 2352 ntBASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 Z85996.1-201ENST00000494644 937 ntBASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.15■□□□□ 0.34
NHLRC1Q6VVB1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
NHLRC1Q6VVB1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 AC007613.1-201ENST00000572811 2597 ntBASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NHLRC1Q6VVB1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms