Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NIPAL3Q6P499 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NIPAL3Q6P499 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NIPAL3Q6P499 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NIPAL3Q6P499 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NIPAL3Q6P499 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
NIPAL3Q6P499 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 ABHD17AP1-201ENST00000358206 933 ntBASIC17.39■□□□□ 0.37
NIPAL3Q6P499 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NIPAL3Q6P499 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NIPAL3Q6P499 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 AC004264.1-201ENST00000608354 794 ntBASIC17.37■□□□□ 0.37
NIPAL3Q6P499 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
NIPAL3Q6P499 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NIPAL3Q6P499 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms