Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.47■□□□□ 0.39
TMEM53Q6P2H8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AC005829.2-201ENST00000571422 1056 ntBASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 AC099778.1-201ENST00000568593 1911 ntBASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM53Q6P2H8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM53Q6P2H8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM53Q6P2H8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 AC068880.1-201ENST00000507289 2297 ntBASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 BX119927.1-201ENST00000636596 1552 ntBASIC17.45■□□□□ 0.38
TMEM53Q6P2H8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 PNMA6B-201ENST00000538162 1200 ntBASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM53Q6P2H8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms