Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TSPY15P-201ENST00000457163 923 ntBASIC19.92■□□□□ 0.78
TRNP1Q6NT89 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 AC093827.2-201ENST00000512654 315 ntBASIC19.92■□□□□ 0.78
TRNP1Q6NT89 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 AP003071.4-201ENST00000562276 1284 ntBASIC19.92■□□□□ 0.78
TRNP1Q6NT89 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 AP006294.2-201ENST00000641667 209 ntBASIC19.92■□□□□ 0.78
TRNP1Q6NT89 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRNP1Q6NT89 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 FAM207BP-201ENST00000447172 505 ntBASIC19.91■□□□□ 0.78
TRNP1Q6NT89 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.91■□□□□ 0.78
TRNP1Q6NT89 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 AL596275.1-201ENST00000423464 877 ntBASIC19.9■□□□□ 0.78
TRNP1Q6NT89 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 CKBP1-201ENST00000565489 1086 ntBASIC19.9■□□□□ 0.78
TRNP1Q6NT89 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRNP1Q6NT89 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TRNP1Q6NT89 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.89■□□□□ 0.78
TRNP1Q6NT89 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRNP1Q6NT89 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRNP1Q6NT89 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 CROCCP3-202ENST00000420820 1947 ntBASIC19.89■□□□□ 0.77
TRNP1Q6NT89 AL355355.2-201ENST00000442321 338 ntBASIC19.89■□□□□ 0.77
TRNP1Q6NT89 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 PRSS44-201ENST00000515154 1146 ntBASIC19.89■□□□□ 0.77
TRNP1Q6NT89 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 AC093503.3-201ENST00000624917 2352 ntBASIC19.89■□□□□ 0.77
TRNP1Q6NT89 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRNP1Q6NT89 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 AC079598.2-202ENST00000546624 1451 ntBASIC19.88■□□□□ 0.77
TRNP1Q6NT89 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRNP1Q6NT89 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms