Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LPCAT4Q643R3 AC084018.2-201ENST00000613093 2607 ntBASIC18.02■□□□□ 0.48
LPCAT4Q643R3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 AC135279.3-201ENST00000610945 1311 ntBASIC18.02■□□□□ 0.48
LPCAT4Q643R3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.02■□□□□ 0.48
LPCAT4Q643R3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LPCAT4Q643R3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 AC080080.1-201ENST00000625121 2420 ntBASIC18.02■□□□□ 0.47
LPCAT4Q643R3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LPCAT4Q643R3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 CYP21A1P-202ENST00000354927 1481 ntBASIC18.01■□□□□ 0.47
LPCAT4Q643R3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 CCDC92B-201ENST00000575506 885 ntBASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AP001160.3-201ENST00000601484 763 ntBASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AC104187.1-201ENST00000607510 612 ntBASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LPCAT4Q643R3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
LPCAT4Q643R3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
LPCAT4Q643R3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
LPCAT4Q643R3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18■□□□□ 0.47
LPCAT4Q643R3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18■□□□□ 0.47
LPCAT4Q643R3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18■□□□□ 0.47
LPCAT4Q643R3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18■□□□□ 0.47
LPCAT4Q643R3 AC131212.1-201ENST00000613771 668 ntBASIC18■□□□□ 0.47
LPCAT4Q643R3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LPCAT4Q643R3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
LPCAT4Q643R3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18■□□□□ 0.47
LPCAT4Q643R3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 HTR7P1-202ENST00000624664 4411 ntBASIC17.99■□□□□ 0.47
LPCAT4Q643R3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LPCAT4Q643R3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms