Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.91■□□□□ 0.78
TTC39BQ5VTQ0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 RBM17P1-201ENST00000453646 1190 ntBASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 Z85996.1-201ENST00000494644 937 ntBASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 BX088651.1-201ENST00000540551 451 ntBASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 RCC2P6-201ENST00000526625 1557 ntBASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TTC39BQ5VTQ0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
TTC39BQ5VTQ0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TTC39BQ5VTQ0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
TTC39BQ5VTQ0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 MESTP1-201ENST00000404287 994 ntBASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 AC004951.3-201ENST00000418645 1148 ntBASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 AC073912.3-201ENST00000624414 853 ntBASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TTC39BQ5VTQ0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.88■□□□□ 0.77
TTC39BQ5VTQ0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TTC39BQ5VTQ0 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms