Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 COPE-202ENST00000349893 948 ntTSL 2 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 AL157888.1-201ENST00000631930 593 ntBASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PRPF38BQ5VTL8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 AC254562.1-201ENST00000417586 456 ntBASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 MINOS1P3-201ENST00000457048 203 ntBASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PRPF38BQ5VTL8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 C9orf163-202ENST00000624034 2573 ntBASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PRPF38BQ5VTL8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
PRPF38BQ5VTL8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.7■□□□□ 0.91
PRPF38BQ5VTL8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRPF38BQ5VTL8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRPF38BQ5VTL8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRPF38BQ5VTL8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 KRT8P41-201ENST00000533985 1514 ntBASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 AL592071.1-201ENST00000611956 408 ntBASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.7■□□□□ 0.9
PRPF38BQ5VTL8 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 FAM99A-202ENST00000538190 1989 ntBASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.69■□□□□ 0.9
PRPF38BQ5VTL8 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms