Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 AL023803.3-201ENST00000615559 522 ntBASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 AC092338.2-201ENST00000568827 1415 ntBASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PRAMEF17Q5VTA0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 ARMC10P1-201ENST00000313754 855 ntBASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 DUX4L26-201ENST00000489078 1255 ntBASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PRAMEF17Q5VTA0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 CCR12P-201ENST00000446203 998 ntBASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.2■□□□□ 0.5
PRAMEF17Q5VTA0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 HMGA1P5-201ENST00000412453 271 ntBASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 WWOX-216ENST00000569818 525 ntBASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 AL590326.2-201ENST00000625139 305 ntBASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms