Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 AC026271.3-201ENST00000571884 352 ntBASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTSL3PQ5NE16 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 AL031985.4-201ENST00000642138 673 ntBASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTSL3PQ5NE16 AL135905.2-201ENST00000584934 1404 ntBASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 AL020996.1-203ENST00000536896 2307 ntBASIC18.83■□□□□ 0.61
CTSL3PQ5NE16 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 RPS2P55-201ENST00000397318 883 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 MESTP1-201ENST00000404287 994 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 AC011506.1-201ENST00000474329 610 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 AC107956.1-201ENST00000494359 873 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 CD177P1-201ENST00000606252 935 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 TMEM191A-211ENST00000637163 1067 ntBASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.83■□□□□ 0.6
CTSL3PQ5NE16 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 AC004951.3-201ENST00000418645 1148 ntBASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 AC113410.3-201ENST00000623366 203 ntBASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CTSL3PQ5NE16 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 AC012618.2-201ENST00000428058 849 ntBASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 AC233702.5-201ENST00000584107 538 ntBASIC18.81■□□□□ 0.6
CTSL3PQ5NE16 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms