Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
ALFQ53S48 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ALFQ53S48 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.66■□□□□ 0.74
ALFQ53S48 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.66■□□□□ 0.74
ALFQ53S48 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
ALFQ53S48 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ALFQ53S48 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.66■□□□□ 0.74
ALFQ53S48 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ALFQ53S48 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.65■□□□□ 0.74
ALFQ53S48 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ALFQ53S48 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.65■□□□□ 0.74
ALFQ53S48 TSPY21P-201ENST00000433481 731 ntBASIC19.65■□□□□ 0.74
ALFQ53S48 AC010947.1-201ENST00000623454 693 ntBASIC19.65■□□□□ 0.74
ALFQ53S48 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.65■□□□□ 0.74
ALFQ53S48 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ALFQ53S48 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
ALFQ53S48 AC138932.1-201ENST00000534164 6830 ntBASIC19.65■□□□□ 0.74
ALFQ53S48 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.64■□□□□ 0.74
ALFQ53S48 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.64■□□□□ 0.74
ALFQ53S48 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ALFQ53S48 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.64■□□□□ 0.73
ALFQ53S48 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.64■□□□□ 0.73
ALFQ53S48 PRSS44-201ENST00000515154 1146 ntBASIC19.64■□□□□ 0.73
ALFQ53S48 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.64■□□□□ 0.73
ALFQ53S48 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.64■□□□□ 0.73
ALFQ53S48 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ALFQ53S48 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ALFQ53S48 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ALFQ53S48 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 AC141586.3-201ENST00000562166 1838 ntBASIC19.63■□□□□ 0.73
ALFQ53S48 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ALFQ53S48 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.63■□□□□ 0.73
ALFQ53S48 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ALFQ53S48 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ALFQ53S48 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 AC211429.1-201ENST00000415277 523 ntBASIC19.63■□□□□ 0.73
ALFQ53S48 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
ALFQ53S48 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ALFQ53S48 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.63■□□□□ 0.73
ALFQ53S48 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.63■□□□□ 0.73
ALFQ53S48 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ALFQ53S48 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ALFQ53S48 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ALFQ53S48 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.63■□□□□ 0.73
ALFQ53S48 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALFQ53S48 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ALFQ53S48 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms