Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ATP6AP1LQ52LC2 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 AL031598.1-201ENST00000561511 1773 ntBASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 AC093525.10-201ENST00000625130 1569 ntBASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP6AP1LQ52LC2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 SOX15-203ENST00000570788 1093 ntBASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP6AP1LQ52LC2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.46■□□□□ 0.54
ATP6AP1LQ52LC2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 AC104581.1-202ENST00000635932 2618 ntBASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ATP6AP1LQ52LC2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms