Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM259Q4ZIN3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TMEM259Q4ZIN3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 DGCR10-201ENST00000609839 495 ntBASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TMEM259Q4ZIN3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.42■□□□□ 0.7
TMEM259Q4ZIN3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 AC009237.14-201ENST00000609975 1594 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 RCN1P1-201ENST00000400413 996 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 KRT18P21-201ENST00000515767 1272 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 AC010947.1-201ENST00000623454 693 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TMEM259Q4ZIN3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 AP005242.2-201ENST00000580065 1175 ntBASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.4■□□□□ 0.7
TMEM259Q4ZIN3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms