Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 AC093827.2-201ENST00000512654 315 ntBASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 AC004264.1-201ENST00000608354 794 ntBASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KHDC1Q4VXA5 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 HTR7P1-201ENST00000538670 1336 ntBASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
KHDC1Q4VXA5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
KHDC1Q4VXA5 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 TUBB8P6-201ENST00000436895 1288 ntBASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 RARRES2P10-201ENST00000564312 460 ntBASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 C1QL1P1-201ENST00000568105 661 ntBASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.32■□□□□ 0.68
KHDC1Q4VXA5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 RPS2P55-201ENST00000397318 883 ntBASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AC107956.1-201ENST00000494359 873 ntBASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.31■□□□□ 0.68
KHDC1Q4VXA5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.3■□□□□ 0.68
KHDC1Q4VXA5 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms