Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.39■■□□□ 1.18
CERKLQ49MI3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CERKLQ49MI3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CERKLQ49MI3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CERKLQ49MI3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.39■■□□□ 1.17
CERKLQ49MI3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CERKLQ49MI3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CERKLQ49MI3 AL359075.1-203ENST00000462729 1002 ntBASIC22.39■■□□□ 1.17
CERKLQ49MI3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CERKLQ49MI3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 AC008622.2-201ENST00000617006 1229 ntBASIC22.39■■□□□ 1.17
CERKLQ49MI3 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 PCDHAC2-203ENST00000615316 3011 ntBASIC22.39■■□□□ 1.17
CERKLQ49MI3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CERKLQ49MI3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CERKLQ49MI3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 TREX1-205ENST00000625293 1783 ntBASIC22.38■■□□□ 1.17
CERKLQ49MI3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 AP000523.1-201ENST00000398242 1049 ntBASIC22.38■■□□□ 1.17
CERKLQ49MI3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.38■■□□□ 1.17
CERKLQ49MI3 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CERKLQ49MI3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CERKLQ49MI3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CERKLQ49MI3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.37■■□□□ 1.17
CERKLQ49MI3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CERKLQ49MI3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CERKLQ49MI3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 NEK4P2-201ENST00000580004 1012 ntBASIC22.37■■□□□ 1.17
CERKLQ49MI3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.37■■□□□ 1.17
CERKLQ49MI3 AC091076.1-201ENST00000610741 619 ntBASIC22.37■■□□□ 1.17
CERKLQ49MI3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.37■■□□□ 1.17
CERKLQ49MI3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CERKLQ49MI3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.36■■□□□ 1.17
CERKLQ49MI3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 KRT18P38-201ENST00000449496 1282 ntBASIC22.35■■□□□ 1.17
CERKLQ49MI3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 CR769767.2-201ENST00000622735 460 ntBASIC22.35■■□□□ 1.17
CERKLQ49MI3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CERKLQ49MI3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CERKLQ49MI3 AC125437.2-201ENST00000625180 2167 ntBASIC22.35■■□□□ 1.17
CERKLQ49MI3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
CERKLQ49MI3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CERKLQ49MI3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC22.34■■□□□ 1.17
CERKLQ49MI3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms