Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RSPO1Q2MKA7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.57■□□□□ 0.24
RSPO1Q2MKA7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 AC011506.1-201ENST00000474329 610 ntBASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 AL031598.1-201ENST00000561511 1773 ntBASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RSPO1Q2MKA7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 MESTP1-201ENST00000404287 994 ntBASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AL158047.1-201ENST00000445918 881 ntBASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AL031985.4-201ENST00000642138 673 ntBASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 AC093525.10-201ENST00000625130 1569 ntBASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.55■□□□□ 0.24
RSPO1Q2MKA7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 RNF165-205ENST00000588679 2904 ntBASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.54■□□□□ 0.24
RSPO1Q2MKA7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 AL512353.2-201ENST00000448759 1962 ntBASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 AC004951.3-201ENST00000418645 1148 ntBASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.53■□□□□ 0.24
RSPO1Q2MKA7 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms