Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC22.95■■□□□ 1.26
PDS5AQ29RF7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.94■■□□□ 1.26
PDS5AQ29RF7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 AL023284.2-201ENST00000405850 579 ntBASIC22.94■■□□□ 1.26
PDS5AQ29RF7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 AC087388.1-201ENST00000571370 1112 ntBASIC22.94■■□□□ 1.26
PDS5AQ29RF7 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.94■■□□□ 1.26
PDS5AQ29RF7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PDS5AQ29RF7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 AL031133.1-201ENST00000406807 723 ntBASIC22.93■■□□□ 1.26
PDS5AQ29RF7 AC092647.4-201ENST00000457211 535 ntBASIC22.93■■□□□ 1.26
PDS5AQ29RF7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PDS5AQ29RF7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PDS5AQ29RF7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 AC140113.3-201ENST00000605663 199 ntBASIC22.91■■□□□ 1.26
PDS5AQ29RF7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PDS5AQ29RF7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms