Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 CROCCP3-202ENST00000420820 1947 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 AL049812.1-201ENST00000432563 2267 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH1Q08174 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PCDH1Q08174 TSPY20P-201ENST00000450910 630 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH1Q08174 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH1Q08174 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH1Q08174 AL359736.2-201ENST00000621992 437 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC131212.4-201ENST00000623606 975 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.43■□□□□ 0.54
PCDH1Q08174 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.43■□□□□ 0.54
PCDH1Q08174 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 AC006333.2-201ENST00000607957 2099 ntBASIC18.43■□□□□ 0.54
PCDH1Q08174 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PCDH1Q08174 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PCDH1Q08174 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH1Q08174 AC093525.10-201ENST00000625130 1569 ntBASIC18.42■□□□□ 0.54
PCDH1Q08174 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDH1Q08174 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PCDH1Q08174 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PCDH1Q08174 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH1Q08174 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.42■□□□□ 0.54
PCDH1Q08174 AC026271.3-201ENST00000571884 352 ntBASIC18.42■□□□□ 0.54
PCDH1Q08174 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PCDH1Q08174 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.42■□□□□ 0.54
PCDH1Q08174 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.42■□□□□ 0.54
PCDH1Q08174 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.42■□□□□ 0.54
PCDH1Q08174 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
PCDH1Q08174 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PCDH1Q08174 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH1Q08174 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH1Q08174 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH1Q08174 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PCDH1Q08174 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.41■□□□□ 0.54
PCDH1Q08174 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
PCDH1Q08174 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH1Q08174 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH1Q08174 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.41■□□□□ 0.54
PCDH1Q08174 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH1Q08174 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH1Q08174 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH1Q08174 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH1Q08174 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH1Q08174 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH1Q08174 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH1Q08174 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PCDH1Q08174 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms