Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COL10A1Q03692 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL10A1Q03692 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL10A1Q03692 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.12■□□□□ 0.17
COL10A1Q03692 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.12■□□□□ 0.17
COL10A1Q03692 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.12■□□□□ 0.17
COL10A1Q03692 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.12■□□□□ 0.17
COL10A1Q03692 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 FAM197Y4-202ENST00000622692 608 ntBASIC16.12■□□□□ 0.17
COL10A1Q03692 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.12■□□□□ 0.17
COL10A1Q03692 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL10A1Q03692 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.12■□□□□ 0.17
COL10A1Q03692 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.11■□□□□ 0.17
COL10A1Q03692 AP000974.1-201ENST00000623909 2387 ntBASIC16.11■□□□□ 0.17
COL10A1Q03692 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL10A1Q03692 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL10A1Q03692 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.11■□□□□ 0.17
COL10A1Q03692 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.11■□□□□ 0.17
COL10A1Q03692 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.11■□□□□ 0.17
COL10A1Q03692 AL160286.2-201ENST00000567150 934 ntBASIC16.11■□□□□ 0.17
COL10A1Q03692 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.11■□□□□ 0.17
COL10A1Q03692 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
COL10A1Q03692 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.11■□□□□ 0.17
COL10A1Q03692 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.11■□□□□ 0.17
COL10A1Q03692 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL10A1Q03692 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
COL10A1Q03692 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
COL10A1Q03692 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
COL10A1Q03692 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL10A1Q03692 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
COL10A1Q03692 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.1■□□□□ 0.17
COL10A1Q03692 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
COL10A1Q03692 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.1■□□□□ 0.17
COL10A1Q03692 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.1■□□□□ 0.17
COL10A1Q03692 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.1■□□□□ 0.17
COL10A1Q03692 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.1■□□□□ 0.17
COL10A1Q03692 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.1■□□□□ 0.17
COL10A1Q03692 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.1■□□□□ 0.17
COL10A1Q03692 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
COL10A1Q03692 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.1■□□□□ 0.17
COL10A1Q03692 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
COL10A1Q03692 AC004408.2-201ENST00000623613 2777 ntBASIC16.09■□□□□ 0.17
COL10A1Q03692 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL10A1Q03692 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL10A1Q03692 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
COL10A1Q03692 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.09■□□□□ 0.17
COL10A1Q03692 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
COL10A1Q03692 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
COL10A1Q03692 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms